USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: EF1D_HUMAN USC-OGP 2-DE database:  EF1D_HUMAN EF1D_HUMAN General information about the entry View entry in simple text format Entry name EF1D_HUMAN Primary accession number P29692 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Elongation factor 1-delta; Short=EF-1-delta; AltName: Full=Antigen NY-CO-4;. Gene name Name=EEF1D Synonyms=EF1D Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein PLATELET_4-5 {PLATELET 4-5} Homo sapiens (Human)   map experimental info   PLATELET_4-5 MAP LOCATIONS: SPOT OGP-0115: pI=4.88; Mw=37168 UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1208: pI=5.03; Mw=37929 Cross-references UniProtKB/Swiss-Prot P29692; EF1D_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name EF1D_HUMAN Primary accession number P29692 Secondary accession number(s) B4DDU4 D3DWK3 E9PBQ9 Q4VBZ6 Q969J1 Q96I38 Sequence was last modified on  January 23, 2007 (version 5) Annotations were last modified on  March 15, 2017 (version 186) Name and origin of the protein Description RecName: Full=Elongation factor 1-delta; Short=EF-1-delta; AltName: Full=Antigen NY-CO-4; Gene name Name=EEF1D Synonyms=EF1D Encoded on Name=EEF1D; Synonyms=EF1D Keywords 3D-structure; Acetylation; Alternative splicing; Complete proteome; Direct protein sequencing; DNA-binding; Elongation factor; Nucleus; Phosphoprotein; Protein biosynthesis; Reference proteome; Transcription; Transcription regulation. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL Z21507; CAA79716.1; -; mRNA EMBL BT007242; AAP35906.1; -; mRNA EMBL AK293339; BAG56855.1; -; mRNA EMBL AC067930; -; NOT_ANNOTATED_CDS; Genomic_DNA EMBL CH471162; EAW82227.1; -; Genomic_DNA EMBL CH471162; EAW82228.1; -; Genomic_DNA EMBL CH471162; EAW82229.1; -; Genomic_DNA EMBL CH471162; EAW82230.1; -; Genomic_DNA EMBL CH471162; EAW82232.1; -; Genomic_DNA EMBL BC007847; AAH07847.1; -; mRNA EMBL BC009907; AAH09907.1; -; mRNA EMBL BC012819; AAH12819.1; -; mRNA EMBL BC062535; AAH62535.1; -; mRNA EMBL BC094806; AAH94806.1; -; mRNA CCDS CCDS47930.1; -. [P29692-3]; . CCDS CCDS56559.1; -. [P29692-4]; . CCDS CCDS6404.1; -. [P29692-2]; . CCDS CCDS6405.1; -. [P29692-1]; . PIR S34626; S34626; . RefSeq NP_001123525.2; NM_001130053.3; . RefSeq NP_001123527.1; NM_001130055.3. [P29692-1]; . RefSeq NP_001123528.1; NM_001130056.3. [P29692-3]; . RefSeq NP_001123529.1; NM_001130057.3. [P29692-1]; . RefSeq NP_001182132.1; NM_001195203.2. [P29692-4]; . RefSeq NP_001276879.1; NM_001289950.2. [P29692-1]; . RefSeq NP_001304672.1; NM_001317743.2. [P29692-3]; . RefSeq NP_001317575.1; NM_001330646.1. [P29692-3]; . RefSeq NP_001951.2; NM_001960.5. [P29692-1]; . RefSeq NP_115754.3; NM_032378.5; . RefSeq XP_005250880.1; XM_005250823.1. [P29692-2]; . RefSeq XP_006716585.1; XM_006716522.1. [P29692-2]; . RefSeq XP_006716586.1; XM_006716523.1. [P29692-2]; . RefSeq XP_006716587.1; XM_006716524.1. [P29692-2]; . RefSeq XP_006716588.1; XM_006716525.1. [P29692-1]; . RefSeq XP_011515207.1; XM_011516905.2. [P29692-2]; . RefSeq XP_011515208.1; XM_011516906.2. [P29692-2]; . RefSeq XP_016868659.1; XM_017013170.1. [P29692-2]; . UniGene Hs.333388; -; . UniGene Hs.686554; -; . UniGene Hs.703306; -; . PDB 2MVM; NMR; -; A=153-192 PDB 2MVN; NMR; -; A=153-192 PDB 2N51; NMR; -; A=153-281 PDBsum 2MVM; -; . PDBsum 2MVN; -; . PDBsum 2N51; -; . ProteinModelPortal P29692; -; . SMR P29692; -; . BioGrid 108256; 128; . IntAct P29692; 88; . MINT MINT-1139610; -; . STRING 9606.ENSP00000391944; -; . iPTMnet P29692; -; . PhosphoSitePlus P29692; -; . SwissPalm P29692; -; . BioMuta EEF1D; -; . DMDM 20141357; -; . OGP P29692; -; . EPD P29692; -; . MaxQB P29692; -; . PaxDb P29692; -; . PeptideAtlas P29692; -; . PRIDE P29692; -; . TopDownProteomics P29692-1; -. [P29692-1]; . TopDownProteomics P29692-3; -. [P29692-3]; . TopDownProteomics P29692-4; -. [P29692-4]; . DNASU 1936; -; . Ensembl ENST00000317198; ENSP00000317399; ENSG00000104529. [P29692-1]; . Ensembl ENST00000395119; ENSP00000378551; ENSG00000104529. [P29692-1]; . Ensembl ENST00000419152; ENSP00000388261; ENSG00000104529. [P29692-1]; . Ensembl ENST00000423316; ENSP00000410059; ENSG00000104529. [P29692-2]; . Ensembl ENST00000442189; ENSP00000391944; ENSG00000104529. [P29692-2]; . Ensembl ENST00000524624; ENSP00000435697; ENSG00000104529. [P29692-3]; . Ensembl ENST00000526838; ENSP00000436507; ENSG00000104529. [P29692-4]; . Ensembl ENST00000528610; ENSP00000431763; ENSG00000104529. [P29692-3]; . Ensembl ENST00000529272; ENSP00000434872; ENSG00000104529. [P29692-1]; . Ensembl ENST00000614575; ENSP00000478340; ENSG00000273594. [P29692-1]; . Ensembl ENST00000615067; ENSP00000479653; ENSG00000273594. [P29692-1]; . Ensembl ENST00000615698; ENSP00000483527; ENSG00000273594. [P29692-1]; . Ensembl ENST00000619144; ENSP00000477608; ENSG00000273594. [P29692-2]; . Ensembl ENST00000620155; ENSP00000480505; ENSG00000273594. [P29692-2]; . Ensembl ENST00000631698; ENSP00000488672; ENSG00000273594. [P29692-4]; . Ensembl ENST00000632587; ENSP00000487680; ENSG00000273594. [P29692-1]; . Ensembl ENST00000632675; ENSP00000488026; ENSG00000273594. [P29692-3]; . Ensembl ENST00000632965; ENSP00000488275; ENSG00000273594. [P29692-3]; . GeneID 1936; -; . KEGG hsa:1936; -; . UCSC uc003yyr.4; human. [P29692-1]; . CTD 1936; -; . DisGeNET 1936; -; . GeneCards EEF1D; -; . H-InvDB HIX0034587; -; . HGNC HGNC:3211; EEF1D; . HPA HPA045101; -; . HPA HPA051002; -; . MIM 130592; gene; . neXtProt NX_P29692; -; . OpenTargets ENSG00000104529; -; . PharmGKB PA27647; -; . eggNOG KOG1668; Eukaryota; . eggNOG COG2092; LUCA; . GeneTree ENSGT00390000011747; -; . HOGENOM HOG000207272; -; . HOVERGEN HBG000787; -; . InParanoid P29692; -; . KO K15410; -; . PhylomeDB P29692; -; . TreeFam TF313134; -; . Reactome R-HSA-156842; Eukaryotic Translation Elongation; . SIGNOR P29692; -; . ChiTaRS EEF1D; human; . GeneWiki EEF1D; -; . GenomeRNAi 1936; -; . PRO PR:P29692; -; . Proteomes UP000005640; Chromosome 8; . Bgee ENSG00000104529; -; . CleanEx HS_EEF1D; -; . ExpressionAtlas P29692; baseline and differential; . Genevisible P29692; HS; . GO GO:0005737; C:cytoplasm; IDA:UniProtKB; . GO GO:0005829; C:cytosol; IDA:HPA; . GO GO:0005853; C:eukaryotic translation elongation factor 1 complex; TAS:ProtInc; . GO GO:0001650; C:fibrillar center; IDA:HPA; . GO GO:0005634; C:nucleus; IDA:UniProtKB; . GO GO:0033613; F:activating transcription factor binding; IPI:UniProtKB; . GO GO:0045296; F:cadherin binding; IDA:BHF-UCL; . GO GO:0003677; F:DNA binding; IDA:UniProtKB; . GO GO:0031072; F:heat shock protein binding; IPI:UniProtKB; . GO GO:0004871; F:signal transducer activity; IMP:UniProtKB; . GO GO:0003746; F:translation elongation factor activity; IEA:UniProtKB-KW; . GO GO:0008135; F:translation factor activity; RNA binding; TAS:ProtInc GO GO:0071479; P:cellular response to ionizing radiation; IDA:UniProtKB; . GO GO:0009299; P:mRNA transcription; IDA:UniProtKB; . GO GO:0043123; P:positive regulation of I-kappaB kinase/NF-kappaB signaling; IMP:UniProtKB; . GO GO:0010941; P:regulation of cell death; IMP:UniProtKB; . GO GO:0006355; P:regulation of transcription; DNA-templated; IEA:UniProtKB-KW GO GO:0006351; P:transcription; DNA-templated; IEA:UniProtKB-KW GO GO:0006414; P:translational elongation; TAS:Reactome; . CDD cd00292; EF1B; 1; . Gene3D 3.30.70.60; -; 1; . InterPro IPR018940; EF-1_beta_acid_region_euk; . InterPro IPR014038; EF1B_bsu/dsu_GNE; . InterPro IPR014717; Transl_elong_EF1B/ribosomal_S6; . InterPro IPR001326; Transl_elong_EF1B_B/D_CS; . Pfam PF10587; EF-1_beta_acid; 1; . Pfam PF00736; EF1_GNE; 1; . SMART SM01182; EF-1_beta_acid; 1; . SMART SM00888; EF1_GNE; 1; . SUPFAM SSF54984; SSF54984; 1; . PROSITE PS00824; EF1BD_1; 1; . PROSITE PS00825; EF1BD_2; 1; .

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